Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prka family serine protein kinase | ALO35_05274 | P0ACY5 | Negative | 800020 - 801405 | 53307.1 |
| thiosulfate sulfurtransferase glpe | ALO35_02905 | Q48NU0 | Negative | 802231 - 802551 | 11680.5 |
| bis-tetraphosphatase, symmetrical | ALO35_02906 | Q48NT9 | Negative | 802548 - 803444 | 33503.0 |
| protein apag | ALO35_02907 | Q88A47 | Negative | 803444 - 803878 | 16157.2 |
| ribosomal rna small subunit methyltransferase a | ALO35_100091 | Q48NT7 | Negative | 803938 - 804744 | 29937.2 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | ALO35_02908 | Q88A45 | Negative | 804741 - 805730 | 35033.6 |
| chaperone sura | ALO35_02909 | Q48NT5 | Negative | 805727 - 807055 | 49032.4 |
| lps-assembly protein lptd | ALO35_02910 | Q48NT4 | Negative | 807030 - 809816 | 104550.0 |
| uncharacterized protein | ALO35_02911 | Q88QT3 | Positive | 809946 - 810971 | 38854.5 |
| nucleotidyltransferase family protein | ALO35_02912 | Q88QT2 | Positive | 811036 - 811707 | 24531.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
