Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpod | ALO35_05269 | P52326 | Negative | 788334 - 790184 | 69506.0 |
| dna primase | ALO35_02895 | P0A118 | Negative | 790252 - 792225 | 73547.1 |
| 30s ribosomal protein s21 | ALO35_02896 | Q48NU9 | Negative | 792724 - 792939 | 8386.25 |
| trna n6-adenosine threonylcarbamoyltransferase | ALO35_02897 | Q48NU8 | Positive | 793610 - 794122 | 18356.2 |
| glycerol-3-phosphate acyltransferase | ALO35_02898 | Q48NU7 | Negative | 794158 - 794724 | 19465.5 |
| dihydroneopterin aldolase | ALO35_02899 | P0AC17 | Positive | 794876 - 795154 | 9707.73 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | ALO35_02900 | O66550 | Positive | 795145 - 795669 | 19251.4 |
| multifunctional cca protein | ALO35_02901 | Q48NU4 | Negative | 795742 - 796971 | 46078.4 |
| spovr like family protein | ALO35_05273 | P29013 | Negative | 797068 - 798663 | 62332.9 |
| hypothetical protein | ALO35_02903 | Q48NU2 | Negative | 798627 - 799898 | 48803.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
