Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO35_01354 | Not Available | Positive | 770073 - 771554 | 53267.9 |
| tonb-dependent receptor | ALO35_05292 | P46359 | Negative | 772359 - 773942 | 57461.2 |
| transcriptional regulator, laci family | ALO35_02963 | O07567 | Positive | 773879 - 774925 | 37704.2 |
| sulfate transporter family protein | ALO35_05318 | Q8GYH8 | Positive | 775006 - 776515 | 53563.7 |
| shikimate dehydrogenase | ALO35_05319 | A4XNB9 | Negative | 776577 - 777419 | 29937.7 |
| oxygen-dependent coproporphyrinogen-iii oxidase | ALO35_03049 | Q48QH6 | Negative | 777401 - 778042 | 24928.1 |
| amino acid adenylation | ALO35_02886 | Not Available | Positive | 778154 - 779440 | 46597.9 |
| protein product | ALO35_100379 | Not Available | Positive | 780135 - 780440 | 11254.0 |
| uncharacterized protein | ALO35_02887 | Not Available | Positive | 780522 - 780911 | 14051.0 |
| arac family transcriptional regulator | ALO35_02888 | Not Available | Positive | 781041 - 781877 | 31643.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
