Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lipoprotein | ALO35_01794 | Not Available | Positive | 6508 - 7032 | 19119.3 |
| outer membrane protein, ompw family | ALO35_01795 | P17266 | Positive | 7136 - 7822 | 24367.2 |
| 6-carboxy-5,6,7,8-tetrahydropterin synthase | ALO35_02413 | P65871 | Negative | 7902 - 8258 | 13645.2 |
| putative lipoprotein | ALO35_02414 | Not Available | Positive | 8473 - 8781 | 11374.5 |
| peptidase propeptide and ypeb domain protein | ALO35_02415 | Not Available | Positive | 8781 - 9089 | 11783.2 |
| dna-binding response regulator | ALO35_02416 | Q9I0I1 | Positive | 9089 - 9757 | 24622.4 |
| sensor histidine kinase | ALO35_02417 | Q9I0I2 | Positive | 9754 - 11073 | 48690.2 |
| methyl-accepting chemotaxis protein | ALO35_02418 | Q9I0I6 | Positive | 11199 - 12878 | 59612.2 |
| putative membrane protein | ALO35_02419 | Q58578 | Positive | 13028 - 14092 | 38930.1 |
| alpha/beta fold family hydrolase | ALO35_02420 | Not Available | Negative | 14196 - 15119 | 33365.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
