Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proteinral secretion pathway protein a | ALO35_01516 | Not Available | Negative | 746487 - 747797 | 44441.9 |
| 3-dehydroquinate synthase | ALO35_01517 | Q48PH0 | Negative | 747808 - 748923 | 40485.0 |
| shikimate kinase | ALO35_01518 | Q48PH1 | Negative | 749027 - 749518 | 18135.1 |
| type iv pilus bioproteinsis protein pilq | ALO35_04914 | P34750 | Negative | 749550 - 751748 | 79067.7 |
| type iv pilus bioproteinsis protein pilp | ALO35_01520 | G3XCX7 | Negative | 751703 - 752230 | 19151.9 |
| type iv pilus bioproteinsis protein pilo | ALO35_01521 | G3XD51 | Negative | 752227 - 752850 | 23198.0 |
| type 4 fimbrial bioproteinsis protein piln | ALO35_01522 | G3XD30 | Negative | 752847 - 753437 | 21878.6 |
| penicillin-binding protein 1a | ALO35_04916 | Q07806 | Positive | 754681 - 757152 | 90472.8 |
| Trna-lys | Not Available | Not Available | Positive | 757185 - 757260 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 757266 - 757342 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
