Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO35_02348 | P0A8Z9 | Negative | 721304 - 721921 | 22611.1 |
| 3',5'-cyclic adenosine monophosphate phosphodiesterase cpda | ALO35_05129 | D4P095 | Negative | 722010 - 722891 | 32238.4 |
| hypothetical protein | ALO35_100514 | Not Available | Negative | 722904 - 723278 | 13273.0 |
| uncharacterized protein | ALO35_02350 | Not Available | Negative | 723476 - 723928 | 17268.9 |
| uncharacterized protein | ALO35_02351 | P83843 | Negative | 723919 - 724566 | 24194.7 |
| putative lipoprotein | ALO35_100274 | Not Available | Positive | 724660 - 725490 | 30632.2 |
| peptide abc transporter, periplasmic peptide-binding protein | ALO35_01637 | Not Available | Positive | 726979 - 728586 | 59585.8 |
| putative dipeptide abc transporter, periplasmic dipeptide-binding protein | ALO35_01638 | Not Available | Positive | 728822 - 730471 | 61434.1 |
| dipeptide abc transporter periplasmic dipeptide-binding protein | ALO35_01639 | A0A0H2ZGV2 | Positive | 730810 - 732387 | 58602.5 |
| oprd family outer membrane protein | ALO35_01640 | Not Available | Positive | 732543 - 733922 | 50717.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
