Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate kinase | ALO35_04404 | Q4ZWV2 | Positive | 710435 - 711154 | 25991.5 |
| hypothetical protein | ALO35_101485 | Not Available | Positive | 711901 - 712047 | 5468.69 |
| uncharacterized protein | ALO35_04405 | Not Available | Positive | 712161 - 712472 | 11148.1 |
| uncharacterized duf72 family protein | ALO35_100118 | Not Available | Positive | 712469 - 713338 | 32927.6 |
| tonb-related protein | ALO35_04406 | Not Available | Negative | 714195 - 714818 | 22913.0 |
| ribosomal rna small subunit methyltransferase j | ALO35_05699 | Q48F42 | Positive | 714861 - 715724 | 30887.5 |
| uncharacterized protein | ALO35_04408 | Not Available | Negative | 715798 - 716487 | 23872.9 |
| uncharacterized protein | ALO35_05700 | Not Available | Positive | 716568 - 716693 | 4114.75 |
| uncharacterized protein | ALO35_05127 | Not Available | Negative | 718371 - 719353 | 35969.8 |
| dna topoisomerase 4 subunit b | ALO35_02347 | Q9HUJ8 | Negative | 719320 - 721227 | 69521.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
