Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar protein flis | ALO35_01575 | Q9I4N6 | Positive | 669465 - 669863 | 14342.4 |
| uncharacterized protein | ALO35_01576 | Not Available | Positive | 669890 - 670186 | 10827.9 |
| flagellar regulator fleq | ALO35_01577 | G3XCV0 | Positive | 670364 - 671839 | 55510.9 |
| flagellar sensor histidine kinase fles | ALO35_01578 | Q9I4N4 | Positive | 671962 - 673176 | 44006.1 |
| sigma-54 dependent dna-binding response regulator fler | ALO35_01579 | Not Available | Positive | 673176 - 674147 | 35409.0 |
| sigma-54 dependent dna-binding response regulator fler | ALO35_01580 | Q9I4N3 | Positive | 674144 - 674593 | 16060.3 |
| flagellar hook-basal body complex protein flie | ALO35_01581 | Q884X9 | Positive | 674837 - 675166 | 11691.1 |
| flagellar m-ring protein | ALO35_01582 | Q51463 | Positive | 675182 - 676966 | 63199.9 |
| phosphorylase | ALO35_05202 | P0AC86 | Negative | 677278 - 679728 | 92024.7 |
| proline iminopeptidase | ALO35_02706 | Q9PD69 | Positive | 680009 - 680980 | 36566.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
