Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc-type transport system, permease protein | ALO35_01332 | Q8FVS6 | Negative | 659675 - 660541 | 32573.3 |
| abc transporter atp-binding protein | ALO35_01333 | Q7NRX5 | Negative | 660534 - 661649 | 41463.1 |
| abc transporter, atp-binding protein | ALO35_01334 | Q13TV1 | Negative | 661649 - 662743 | 40519.9 |
| sigma-54 dependent transcriptional regulator | ALO35_01335 | P28614 | Positive | 663043 - 664368 | 48193.8 |
| sigma-54 dependent transcriptional regulator | ALO35_01336 | Q9APD9 | Positive | 664314 - 664892 | 22326.6 |
| putative 3-oxoacyl- synthase iii | ALO35_01571 | Q9CHG0 | Positive | 665199 - 666125 | 32951.2 |
| flagellin flic | ALO35_01572 | P21184 | Positive | 666455 - 667303 | 29280.1 |
| putative flagellin flag | ALO35_100164 | Not Available | Positive | 667367 - 667768 | 14292.9 |
| flagellar hook-associated protein flid | ALO35_01573 | Not Available | Positive | 667851 - 668273 | 14412.6 |
| flagellar hook-associated protein flid | ALO35_01574 | O33421 | Positive | 668284 - 669333 | 35450.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
