Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative sugar efflux transporter | ALO35_04050 | Q48N46 | Negative | 641953 - 643212 | 44161.6 |
| putative membrane protein | ALO35_100642 | P40761 | Negative | 643429 - 643881 | 17193.1 |
| alkylphosphonate utilization operon protein phna | ALO35_04051 | P0AFJ3 | Negative | 643981 - 644322 | 12099.5 |
| acyltransferase family protein | ALO35_100672 | Not Available | Positive | 644542 - 646614 | 77257.1 |
| hd domain-containing protein | ALO35_04052 | P46144 | Positive | 646644 - 647339 | 25724.5 |
| methyl-accepting chemotaxis protein | ALO35_04053 | Q88JK6 | Positive | 647459 - 648964 | 52875.3 |
| carbonic anhydrase | ALO35_04054 | P61517 | Negative | 649175 - 649813 | 24150.9 |
| uncharacterized protein | ALO35_04055 | Not Available | Positive | 649984 - 650391 | 14955.5 |
| ribosomal-protein-alanine acetyltransferase | ALO35_04056 | Q8ZJW4 | Negative | 650401 - 650853 | 17235.7 |
| uncharacterized protein | ALO35_04057 | Not Available | Negative | 650846 - 651451 | 22352.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
