Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | ALO35_05601 | Not Available | Negative | 631448 - 631598 | 5094.12 |
| sensory box protein/methyl-accepting chemotaxis protein | ALO35_05602 | Q9I3S1 | Negative | 631676 - 632700 | 38032.4 |
| gdp-6-deoxy-d-lyxo-4-hexulose reductase | ALO35_05603 | Q9HTB6 | Positive | 632958 - 633920 | 34978.9 |
| gdp-mannose 4,6-dehydratase | ALO35_04043 | Q9JRN5 | Negative | 634055 - 635053 | 36937.1 |
| ggdef domain-containing protein | ALO35_04044 | Not Available | Positive | 635464 - 636657 | 44227.5 |
| acetyltransferase | ALO35_04045 | Not Available | Positive | 636741 - 637178 | 16594.8 |
| methyl-accepting chemotaxis protein | ALO35_04046 | Not Available | Negative | 637187 - 637525 | 11914.9 |
| methyl-accepting chemotaxis protein | ALO35_04047 | Not Available | Negative | 637522 - 638802 | 43996.4 |
| uncharacterized protein | ALO35_04048 | Not Available | Positive | 639067 - 641070 | 74334.1 |
| phosphatidylcholine synthase | ALO35_04049 | Q9HXE9 | Positive | 641158 - 641886 | 26814.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
