Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prophage psssm-04, putative transcriptional regulator | ALO35_02924 | Not Available | Positive | 6010494 - 6010760 | 9884.8 |
| mrna 3'-end processing factor | ALO35_03302 | B1ZZL9 | Negative | 4 - 492 | 18136.3 |
| putative lipoprotein | ALO35_01786 | Not Available | Positive | 700 - 936 | 8652.57 |
| ribosomal protein l11 methyltransferase | ALO35_01787 | Not Available | Positive | 933 - 1586 | 24180.8 |
| putative thioredoxin | ALO35_01788 | P77395 | Positive | 1835 - 2707 | 32026.4 |
| uncharacterized protein | ALO35_01789 | Not Available | Negative | 2762 - 3142 | 13535.1 |
| uncharacterized protein | ALO35_01790 | Not Available | Negative | 3177 - 3605 | 16239.7 |
| uncharacterized protein | ALO35_01791 | Not Available | Positive | 3880 - 4467 | 21130.9 |
| abc transporter atp-binding protein | ALO35_01792 | Q2LVM2 | Positive | 4951 - 5232 | 10065.0 |
| permease | ALO35_01793 | Not Available | Positive | 5234 - 6499 | 46347.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
