Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensory box protein | ALO35_04026 | Not Available | Negative | 612869 - 613351 | 18410.0 |
| response regulator | ALO35_05592 | Q8X613 | Negative | 613355 - 614359 | 35953.9 |
| hypothetical protein | ALO35_102494 | Not Available | Positive | 614319 - 614456 | 5248.13 |
| putative toxin-antitoxin system antitoxin component | ALO35_100616 | Q7N4I0 | Positive | 614536 - 615081 | 18486.1 |
| uncharacterized protein | ALO35_04027 | Q7N4H9 | Positive | 615078 - 615548 | 16779.1 |
| hypothetical protein | ALO35_102952 | Not Available | Positive | 615656 - 615805 | 5760.98 |
| s-type pyocin | ALO35_04028 | Not Available | Positive | 615852 - 617894 | 73031.9 |
| mlta domain-containing protein | ALO35_04029 | Not Available | Negative | 618612 - 619394 | 28079.5 |
| acetyltransferase | ALO35_04030 | P46854 | Negative | 619945 - 620430 | 18337.1 |
| phospholipase d family protein | ALO35_05593 | Not Available | Negative | 620545 - 621714 | 43441.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
