Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO35_04234 | Not Available | Positive | 602885 - 603520 | 23625.3 |
| membrane protein, marc family | ALO35_04235 | O66819 | Negative | 603527 - 604123 | 21539.2 |
| sensor histidine kinase/response regulator | ALO35_05647 | Not Available | Negative | 604196 - 607072 | 106142.0 |
| phosphoribosylamine--glycine ligase | ALO35_04237 | Q87VR8 | Negative | 607076 - 608146 | 36699.8 |
| uncharacterized protein | ALO35_04022 | Not Available | Positive | 608347 - 608588 | 8510.41 |
| aldose 1-epimerase family protein | ALO35_04023 | Not Available | Positive | 608563 - 609432 | 31798.7 |
| hypothetical protein | ALO35_101747 | Not Available | Positive | 609677 - 609934 | 9334.26 |
| putative rna polymerase sigma factor sigw | ALO35_04024 | Q3IYV6 | Positive | 610274 - 610882 | 23625.3 |
| transcriptional activator chrr | ALO35_04025 | Not Available | Positive | 610882 - 611544 | 24105.3 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | ALO35_102519 | Q48N21 | Negative | 612005 - 612772 | 26030.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
