Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase dbpa | ALO35_04220 | Not Available | Positive | 582900 - 584150 | 45658.7 |
| branched-chain amino acid abc transporter periplasmic amino acid-binding protein | ALO35_05643 | Not Available | Negative | 584441 - 585706 | 46192.1 |
| uncharacterized protein | ALO35_05644 | Not Available | Negative | 585957 - 589409 | 128478.0 |
| iron-uptake factor | ALO35_04223 | Not Available | Negative | 589647 - 590192 | 19872.6 |
| putative multicopper oxidase | ALO35_100680 | Not Available | Negative | 591082 - 591564 | 17776.6 |
| copper-binding protein | ALO35_05646 | Not Available | Negative | 591512 - 591946 | 14276.4 |
| hypothetical protein | ALO35_101042 | P44191 | Negative | 592017 - 592307 | 10501.5 |
| hypothetical protein | ALO35_102891 | P44190 | Negative | 592310 - 592612 | 11507.9 |
| cobalt-precorrin-6x reductase | ALO35_04224 | Q53139 | Negative | 592762 - 593502 | 27002.2 |
| putative cobalt-precorrin-6a synthase | ALO35_04225 | Q48DG3 | Negative | 593499 - 594611 | 38789.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
