Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein, lysr:lysr, substrate-binding | ALO35_04211 | Not Available | Negative | 572384 - 573247 | 31980.5 |
| major facilitator transporter | ALO35_04212 | Q01602 | Positive | 573354 - 574553 | 41451.6 |
| uncharacterized protein | ALO35_04213 | Q01609 | Positive | 574674 - 575639 | 35329.0 |
| hypothetical protein | ALO35_05642 | A0A481WNM5 | Negative | 575722 - 576546 | 30746.4 |
| regulatory protein, lysr:lysr, substrate-binding protein | ALO35_04215 | P55619 | Positive | 576798 - 577514 | 26134.5 |
| outer membrane protein assembly factor bama | ALO35_04216 | B5F8T8 | Negative | 578068 - 580473 | 87990.2 |
| copper-sensing two-component system response regulator cpxr | ALO35_04217 | Not Available | Positive | 580657 - 581346 | 25763.2 |
| sensor histidine kinase | ALO35_04218 | Not Available | Positive | 581343 - 582407 | 39223.3 |
| sensor histidine kinase | ALO35_04219 | Q04804 | Positive | 582352 - 582606 | 8574.45 |
| hypothetical protein | ALO35_102919 | Not Available | Negative | 582730 - 582936 | 8003.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
