Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO35_04203 | Not Available | Negative | 559612 - 560991 | 53844.4 |
| uncharacterized protein | ALO35_04204 | Not Available | Negative | 561120 - 561869 | 28085.5 |
| uncharacterized protein | ALO35_04205 | Not Available | Positive | 562193 - 562381 | 6964.49 |
| hypothetical protein | ALO35_102209 | Not Available | Positive | 562592 - 563923 | 50775.0 |
| uncharacterized protein | ALO35_04206 | Not Available | Negative | 564441 - 564950 | 18796.7 |
| hypothetical protein | ALO35_101610 | Not Available | Negative | 565032 - 566993 | 74834.0 |
| phage integrase family protein | ALO35_04207 | Not Available | Negative | 566990 - 568873 | 71433.7 |
| phage integrase family protein | ALO35_04208 | Not Available | Negative | 568818 - 570302 | 56905.6 |
| mscs mechanosensitive ion channel | ALO35_04209 | Not Available | Negative | 570373 - 571083 | 26176.8 |
| uncharacterized protein | ALO35_04210 | Not Available | Positive | 571242 - 572354 | 39910.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
