Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO35_04178 | Not Available | Positive | 514387 - 516207 | 67299.0 |
| uncharacterized protein | ALO35_04179 | Not Available | Positive | 517497 - 518558 | 39596.4 |
| uncharacterized protein | ALO35_04180 | Not Available | Negative | 518588 - 519964 | 51991.0 |
| uncharacterized protein | ALO35_05775 | Not Available | Negative | 520106 - 521746 | 59912.8 |
| hypothetical protein | ALO35_04182 | Not Available | Positive | 522139 - 523302 | 43573.3 |
| hnh endonuclease | ALO35_04183 | Not Available | Negative | 523672 - 524823 | 43002.9 |
| uncharacterized protein | ALO35_04184 | Not Available | Positive | 525058 - 526026 | 37631.0 |
| uncharacterized protein | ALO35_04185 | Not Available | Positive | 526407 - 527156 | 28485.0 |
| uncharacterized protein | ALO35_04186 | Not Available | Negative | 527283 - 527741 | 17352.5 |
| putative atp-dependent superfamily ii helicase | ALO35_04187 | P52126 | Negative | 527845 - 530010 | 81862.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
