Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail protein | ALO35_05276 | Not Available | Negative | 6002562 - 6003208 | 22507.8 |
| Tail tube protein | ALO35_02916 | Not Available | Negative | 6003530 - 6003877 | 12454.8 |
| Tail sheath protein | ALO35_02917 | P44233 | Negative | 6003938 - 6005440 | 53282.1 |
| Hypothetical protein | ALO35_02918 | Not Available | Negative | 6005459 - 6005647 | 6996.1 |
| Hypothetical protein | ALO35_100368 | Not Available | Negative | 6005644 - 6006492 | 31456.3 |
| Chemotaxis protein | ALO35_02919 | Not Available | Negative | 6006600 - 6006989 | 14112.7 |
| prophage pspph01, putative cellulase | ALO35_05278 | Not Available | Negative | 6007112 - 6008287 | 42513.4 |
| uncharacterized protein | ALO35_02921 | Not Available | Negative | 6008751 - 6009194 | 16000.3 |
| Putative repressor protein | ALO35_05279 | P69202 | Positive | 6009243 - 6009995 | 28346.5 |
| prophage psssm-04, orf20 | ALO35_02923 | Not Available | Positive | 6010148 - 6010396 | 9320.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
