Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | ALO35_102395 | Not Available | Negative | 503419 - 503568 | 5571.51 |
| uncharacterized protein | ALO35_04172 | Not Available | Positive | 504229 - 504735 | 19038.3 |
| uncharacterized protein | ALO35_04173 | Not Available | Negative | 505088 - 506227 | 42862.3 |
| uncharacterized protein | ALO35_05640 | Not Available | Negative | 506394 - 508469 | 75598.7 |
| hypothetical protein | ALO35_102918 | Not Available | Positive | 508944 - 509102 | 5530.94 |
| rna-directed dna polymerase | ALO35_04174 | Not Available | Positive | 509606 - 510883 | 49707.0 |
| mechanosensitive ion channel family protein | ALO35_04175 | P0AAT4 | Negative | 511472 - 512071 | 22906.5 |
| hypothetical protein | ALO35_103120 | Not Available | Negative | 512594 - 512794 | 7533.05 |
| uncharacterized protein | ALO35_04176 | Not Available | Positive | 512888 - 513955 | 40863.3 |
| uncharacterized protein | ALO35_04177 | Not Available | Positive | 513956 - 514390 | 16448.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
