Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative autotransporter | ALO35_02092 | Not Available | Negative | 494453 - 495562 | 39530.8 |
| putative autotransporter | ALO35_02093 | Not Available | Negative | 495708 - 496487 | 25073.9 |
| lysr family transcriptional regulator | ALO35_03123 | Not Available | Positive | 496492 - 496857 | 13712.6 |
| methyl-accepting chemotaxis protein | ALO35_03124 | Not Available | Positive | 497042 - 498364 | 47152.2 |
| uncharacterized protein | ALO35_03174 | Not Available | Positive | 499236 - 499718 | 18322.9 |
| regulatory protein, luxr | ALO35_03175 | Q6NCZ5 | Negative | 499810 - 500043 | 8394.33 |
| ferredoxin--nadp reductase | ALO35_03176 | Q44532 | Positive | 500380 - 501156 | 29619.5 |
| cation efflux protein | ALO35_04835 | A6TGB7 | Negative | 501192 - 502014 | 29320.0 |
| uncharacterized protein | ALO35_04836 | Not Available | Negative | 502016 - 502225 | 7432.96 |
| uncharacterized protein | ALO35_04171 | Not Available | Negative | 502284 - 502721 | 15908.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
