Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminobutyrate--2-oxoglutarate aminotransferase | ALO35_04973 | Not Available | Positive | 484676 - 485616 | 33633.5 |
| methionine import atp-binding protein metn | ALO35_05485 | Q48PN3 | Positive | 485617 - 485927 | 11378.9 |
| sensor histidine kinase/response regulator | ALO35_00776 | Not Available | Positive | 485928 - 486798 | 31911.3 |
| sensor histidine kinase/response regulator | ALO35_00777 | Q56310 | Positive | 486779 - 487633 | 30879.4 |
| sensor histidine kinase/response regulator | ALO35_00778 | O25153 | Positive | 487582 - 488094 | 19124.5 |
| uncharacterized protein | ALO35_05311 | Not Available | Negative | 488494 - 489153 | 23649.7 |
| large exoprotein s involved in heme utilization or adhesion | ALO35_100721 | Q9ZFG9 | Negative | 490782 - 492866 | 71849.5 |
| hypothetical protein | ALO35_100462 | Not Available | Positive | 493155 - 493385 | 8541.95 |
| laci family transcriptional regulator | ALO35_02090 | Not Available | Negative | 493476 - 493847 | 13146.3 |
| uncharacterized protein | ALO35_02091 | Not Available | Positive | 493967 - 494173 | 7355.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
