Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO35_00162 | Not Available | Positive | 473286 - 473426 | 4902.67 |
| uncharacterized protein | ALO35_00163 | Not Available | Positive | 473515 - 473694 | 6377.64 |
| putative transporter | ALO35_00164 | Not Available | Positive | 473818 - 475032 | 42106.7 |
| atp-dependent helicase hepa | ALO35_05307 | Q48LP5 | Negative | 475090 - 475951 | 31875.0 |
| rna polymerase-associated protein rapa | ALO35_05308 | Not Available | Negative | 475985 - 478087 | 79578.7 |
| uncharacterized protein | ALO35_03006 | Not Available | Positive | 478235 - 478573 | 12543.8 |
| hypothetical protein | ALO35_100630 | Not Available | Positive | 478627 - 478818 | 7331.93 |
| type iii helper protein hopak1 | ALO35_03007 | O34819 | Negative | 479049 - 479903 | 30962.9 |
| peptide synthase | ALO35_04971 | Not Available | Positive | 480043 - 483048 | 108944.0 |
| pyoverdine chromophore synthetase | ALO35_01744 | Q9R9I9 | Positive | 483005 - 484543 | 54854.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
