Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine abc transporter atp-binding protein | ALO35_04580 | O30506 | Negative | 462727 - 463260 | 19777.0 |
| succinylglutamate desuccinylase/aspartoacylase family protein | ALO35_00153 | Not Available | Negative | 463492 - 464604 | 40306.3 |
| arginine/ornithine abc transporter, permease protein | ALO35_00154 | P35114 | Negative | 464606 - 465304 | 26015.5 |
| histidine/lysine/arginine/ornithine abc transporter permease hisq | ALO35_00155 | P0A2J0 | Negative | 465301 - 465990 | 24919.3 |
| arginine/ornithine abc transporter, periplasmic arginine/ornithine-binding protein | ALO35_00156 | Not Available | Negative | 466075 - 466881 | 29136.2 |
| acetyl-coenzyme a synthetase | ALO35_04581 | Q48G09 | Negative | 467385 - 469421 | 73902.0 |
| uncharacterized protein | ALO35_00158 | Not Available | Positive | 469665 - 469931 | 9513.45 |
| transcriptional regulator phhr | ALO35_04582 | P07604 | Negative | 470015 - 471607 | 58141.4 |
| phenylalanine 4-monooxygenase | ALO35_00160 | P43334 | Positive | 471872 - 472669 | 30048.3 |
| putative pterin-4-alpha-carbinolamine dehydratase | ALO35_00161 | Q4ZQG4 | Positive | 472705 - 473061 | 13342.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
