Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | ALO35_01975 | Q03003 | Positive | 451497 - 452801 | 49449.1 |
| hypothetical protein | ALO35_04578 | Q48G22 | Negative | 454558 - 454687 | 4748.96 |
| uncharacterized protein | ALO35_00146 | Not Available | Negative | 454713 - 454997 | 10469.5 |
| n-succinylarginine dihydrolase | ALO35_00147 | Q48G20 | Negative | 455059 - 456411 | 49110.3 |
| n-succinylglutamate 5-semialdehyde dehydrogenase | ALO35_00148 | Q48G19 | Negative | 456495 - 457877 | 47580.6 |
| arginine n-succinyltransferase, beta subunit | ALO35_00149 | P80358 | Negative | 457877 - 458902 | 37406.8 |
| arginine n-succinyltransferase, alpha subunit | ALO35_04579 | P80357 | Negative | 458966 - 460054 | 39241.7 |
| acetylornithine aminotransferase | ALO35_00151 | Q885K0 | Negative | 460138 - 461355 | 43420.0 |
| hypothetical protein | ALO35_100652 | Not Available | Positive | 461341 - 461526 | 6797.45 |
| transcriptional regulator argr | ALO35_101842 | G3XCU2 | Negative | 461592 - 462278 | 25712.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
