Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative glycosyltransferase | ALO35_02748 | Not Available | Positive | 411182 - 414757 | 134079.0 |
| putative glycosyltransferase | ALO35_02749 | Not Available | Positive | 414800 - 416887 | 75506.5 |
| putative glycosyltransferase | ALO35_05214 | P55465 | Positive | 416753 - 417710 | 34847.5 |
| 3-oxoacyl- synthase ii | ALO35_03394 | P0AAI7 | Positive | 417711 - 418398 | 24626.0 |
| putative thioredoxin | ALO35_02068 | Not Available | Negative | 418496 - 418963 | 16901.3 |
| arsenate reductase | ALO35_02069 | P76569 | Positive | 419087 - 419446 | 13177.1 |
| flavoprotein wrba | ALO35_02070 | Q9I509 | Positive | 419696 - 420052 | 12359.0 |
| dna-3-methyladenine glycosylase i | ALO35_100293 | Not Available | Positive | 420095 - 420826 | 27795.7 |
| trna-2-thiocytidine synthetase | ALO35_100766 | Q48FG8 | Negative | 420833 - 421834 | 37725.7 |
| protein sprt | ALO35_05060 | Q48FG7 | Positive | 421862 - 422416 | 19459.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
