Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail protein | ALO35_00189 | Not Available | Positive | 3069504 - 3070292 | 28899.2 |
| phage baseplate assembly protein v | ALO35_00190 | Not Available | Positive | 3070289 - 3070492 | 6747.31 |
| Baseplate assembly protein | ALO35_00191 | Not Available | Positive | 3070492 - 3070788 | 10212.1 |
| Putative tail protein | ALO35_00192 | Not Available | Positive | 3070785 - 3071183 | 15214.9 |
| Tail protein | ALO35_101476 | P44240 | Positive | 3071173 - 3072393 | 44166.6 |
| Tail protein | ALO35_00193 | Not Available | Positive | 3072203 - 3072787 | 20123.2 |
| Putative phage-related tail fiber protein | ALO35_00194 | Not Available | Positive | 3072798 - 3074258 | 51716.8 |
| Bacteriophage side tail fiber assembly factor & structural component | ALO35_00195 | Not Available | Positive | 3074266 - 3074832 | 21001.5 |
| tail fiber assembly domain protein | ALO35_00196 | Not Available | Positive | 3075089 - 3076147 | 38762.1 |
| Glycoside hydrolase family 19 protein | ALO35_04589 | Not Available | Positive | 3076245 - 3076769 | 19107.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
