Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook protein flge | ALO35_02740 | P75937 | Positive | 400482 - 402242 | 61530.5 |
| hypothetical protein | ALO35_102362 | Not Available | Positive | 402304 - 402816 | 18715.5 |
| flagellar basal-body rod protein flgf | ALO35_02741 | P75938 | Positive | 402707 - 403447 | 26122.2 |
| flagellar basal-body rod protein flgg | ALO35_02742 | P0A1J4 | Positive | 403494 - 404201 | 24440.6 |
| flagellar l-ring protein | ALO35_05213 | Q48GC5 | Positive | 404288 - 405061 | 25396.3 |
| flagellar p-ring protein | ALO35_02743 | Q48GC6 | Positive | 405075 - 406418 | 45227.2 |
| peptidoglycan hydrolase flgj | ALO35_02744 | Q9I4P4 | Positive | 406740 - 407420 | 24188.3 |
| flagellar hook-associated protein flgk | ALO35_02745 | Not Available | Positive | 407432 - 409492 | 70009.2 |
| flagellar hook-associated protein flgl | ALO35_02746 | Not Available | Positive | 409506 - 410507 | 34726.5 |
| putative flagellar hook-associated protein 3 | ALO35_02747 | Not Available | Positive | 410488 - 411093 | 20538.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
