Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family protein | ALO35_05098 | Q5BFG8 | Negative | 391437 - 394178 | 98404.1 |
| hypothetical protein | ALO35_100397 | Not Available | Negative | 394175 - 394478 | 10732.5 |
| hypothetical protein | ALO35_101775 | Not Available | Positive | 394884 - 395378 | 17392.2 |
| uncharacterized protein | ALO35_02206 | Not Available | Negative | 395272 - 396159 | 33571.9 |
| putative lipoprotein | ALO35_02207 | Not Available | Negative | 396283 - 396762 | 16848.6 |
| hypothetical protein | ALO35_103107 | Not Available | Negative | 397171 - 397315 | 4932.08 |
| flagellar basal body rod protein flgb | ALO35_02736 | Q8GLP8 | Positive | 397377 - 397784 | 14785.2 |
| flagellar basal body rod protein flgc | ALO35_02737 | Q56894 | Positive | 397788 - 398228 | 15724.3 |
| flagellar basal-body rod modification protein flgd | ALO35_02738 | Not Available | Positive | 398244 - 398930 | 23563.3 |
| flagellar hook protein flge | ALO35_02739 | P0A1J2 | Positive | 398956 - 400281 | 45834.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
