Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO35_05011 | Not Available | Negative | 373300 - 373430 | 4891.95 |
| uncharacterized protein | ALO35_01855 | Q05627 | Negative | 373507 - 373986 | 17510.3 |
| putative lipoprotein | ALO35_01856 | Not Available | Negative | 374083 - 374763 | 24542.1 |
| high-affinity amino acid abc transporter, atp-binding protein | ALO35_01857 | Not Available | Negative | 374941 - 375642 | 25715.5 |
| high-affinity branched-chain amino acid abc transporter, atp-binding protein | ALO35_01858 | P21629 | Negative | 375643 - 376368 | 26000.7 |
| branched-chain amino acid transport system permease protein | ALO35_01859 | P21628 | Negative | 376365 - 377630 | 46275.4 |
| high-affinity branched-chain amino acid abc transporter, permease protein | ALO35_01860 | Not Available | Negative | 377627 - 378550 | 32186.5 |
| high-affinity branched-chain amino acid abc transporter, periplasmic amino acid-binding protein | ALO35_01861 | P21175 | Negative | 378778 - 379971 | 42021.1 |
| ggdef domain/eal domain-containing protein | ALO35_05013 | Not Available | Negative | 380656 - 382986 | 86091.5 |
| hypothetical protein | ALO35_05015 | P39398 | Positive | 383180 - 384511 | 48278.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
