Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemn family oxidoreductase | ALO35_03281 | P52062 | Negative | 364800 - 366014 | 45094.6 |
| non-canonical purine ntp pyrophosphatase | ALO35_03282 | Q87V88 | Negative | 366011 - 366604 | 21094.2 |
| methionine biosynthesis protein metw | ALO35_03283 | Q7UG04 | Negative | 366638 - 367255 | 23332.8 |
| homoserine o-acetyltransferase | ALO35_03284 | Q48PA1 | Negative | 367263 - 368402 | 41652.2 |
| yggt family protein | ALO35_03285 | P25254 | Negative | 368576 - 369166 | 21422.8 |
| pyrroline-5-carboxylate reductase | ALO35_03286 | P22008 | Negative | 369192 - 370010 | 28049.8 |
| uncharacterized protein | ALO35_03287 | P24562 | Negative | 370033 - 370719 | 24531.4 |
| twitching motility protein | ALO35_03288 | P24559 | Positive | 370775 - 371809 | 37923.1 |
| nlp/p60-like protein family protein | ALO35_03289 | Not Available | Negative | 371916 - 372593 | 24785.9 |
| uncharacterized protein | ALO35_03290 | Not Available | Positive | 372809 - 373249 | 16876.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
