Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prophage antirepressor | ALO35_04784 | Not Available | Positive | 353957 - 354382 | 16472.0 |
| uncharacterized protein | ALO35_00909 | Not Available | Negative | 354435 - 354725 | 10485.5 |
| hydroxypyruvate isomerase | ALO35_03274 | Q0KBD1 | Negative | 354934 - 355719 | 29035.3 |
| gluconate transporter family protein | ALO35_05390 | Q46892 | Negative | 355742 - 357325 | 55339.9 |
| uncharacterized protein | ALO35_03276 | Q0KBC9 | Negative | 357369 - 357953 | 19420.1 |
| hopan1 protein | ALO35_03277 | Q48PB0 | Negative | 357953 - 359242 | 44493.4 |
| 3-hydroxyisobutyrate dehydrogenase family protein | ALO35_03278 | Q0KBC7 | Negative | 359253 - 360158 | 30995.5 |
| fe-s-oxidoreductase | ALO35_100008 | Not Available | Negative | 360386 - 360841 | 17153.8 |
| aminotransferase | ALO35_03279 | P77434 | Negative | 361127 - 362233 | 40221.4 |
| uncharacterized protein | ALO35_03280 | Not Available | Negative | 364467 - 364790 | 11451.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
