Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase, biotin carboxylase | ALO35_01631 | Not Available | Positive | 340737 - 342080 | 48606.3 |
| ribosomal protein l11 methyltransferase | ALO35_01632 | Q48DI0 | Positive | 342216 - 343094 | 31737.5 |
| uncharacterized protein | ALO35_04947 | Not Available | Positive | 343064 - 344440 | 51434.9 |
| trna-dihydrouridine synthase | ALO35_01634 | Q87VS1 | Positive | 344758 - 345771 | 36786.2 |
| fis family transcriptional regulator | ALO35_01635 | Q9HUW0 | Positive | 345768 - 346088 | 11722.1 |
| bifunctional purine biosynthesis protein purh | ALO35_04948 | Q87VR9 | Positive | 346148 - 347779 | 58486.2 |
| ribonucleoside-diphosphate reductase subunit beta | ALO35_00905 | Q9Z6S4 | Positive | 347967 - 349214 | 47230.3 |
| uncharacterized protein | ALO35_00906 | Not Available | Positive | 349295 - 350335 | 39192.2 |
| uncharacterized protein | ALO35_00907 | Not Available | Negative | 350556 - 351821 | 48924.0 |
| dynein-related atpase | ALO35_00908 | P15005 | Negative | 351818 - 353371 | 57789.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
