Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO35_102296 | Not Available | Negative | 322079 - 322180 | 3621.38 |
| ggdef domain-containing protein | ALO35_00213 | P54595 | Positive | 322209 - 323795 | 57743.6 |
| acrb/acrd/acrf family transporter | ALO35_00214 | P52002 | Negative | 323834 - 326230 | 84893.1 |
| uncharacterized protein | ALO35_01615 | Not Available | Negative | 326492 - 326785 | 10715.5 |
| penicillin-binding protein 1c | ALO35_01616 | Not Available | Positive | 326881 - 328323 | 52955.2 |
| penicillin-binding protein 1c | ALO35_01617 | P76577 | Positive | 328320 - 328646 | 11325.8 |
| multimodular transpeptidase-transglycosylase | ALO35_01618 | Not Available | Positive | 328956 - 329192 | 8717.24 |
| response regulator | ALO35_01619 | Not Available | Negative | 329213 - 329620 | 15436.7 |
| flp pilus assembly protein cpab | ALO35_04946 | Not Available | Positive | 330171 - 331187 | 36097.2 |
| type ii and iii secretion system protein | ALO35_01621 | P55702 | Positive | 331223 - 332191 | 33232.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
