Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase, zinc-binding protein | ALO35_01029 | Not Available | Positive | 315237 - 315400 | 5932.16 |
| putative nadh quinone oxidoreductase, pig3 family | ALO35_102280 | Q53FA7 | Positive | 315437 - 316227 | 27875.6 |
| phosphoserine phosphatase | ALO35_01030 | Q9I6F6 | Negative | 316177 - 316830 | 23994.5 |
| polyamine abc transporter atp-binding protein | ALO35_01031 | Not Available | Negative | 316925 - 317233 | 11299.6 |
| ammonium transporter | ALO35_00209 | P69680 | Positive | 317358 - 318689 | 45985.1 |
| bacterial luciferase family protein | ALO35_04596 | Q6F9F6 | Negative | 318860 - 319993 | 42266.6 |
| uncharacterized protein | ALO35_00211 | Not Available | Negative | 320115 - 320450 | 11869.4 |
| hypothetical protein | ALO35_102040 | Not Available | Positive | 320609 - 320737 | 4660.7 |
| luciferase family protein | ALO35_04597 | Q65YW9 | Positive | 320774 - 321874 | 40539.9 |
| hypothetical protein | ALO35_102258 | Not Available | Negative | 321732 - 322037 | 11555.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
