Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| unknown protein sequence | ALO35_01999 | Not Available | Negative | 2022701 - 2022904 | 7382.9 |
| Integrase | ALO35_103014 | Not Available | Negative | 2022907 - 2024184 | 47602.3 |
| uncharacterized protein | ALO35_02000 | Not Available | Negative | 2024181 - 2024492 | 11253.4 |
| Nuclease | ALO35_02001 | Not Available | Negative | 2024489 - 2024920 | 16024.8 |
| Hypothetical protein | ALO35_02002 | Not Available | Negative | 2024917 - 2025222 | 11189.5 |
| Atp-binding protein | ALO35_02003 | Not Available | Negative | 2025222 - 2026016 | 29263.3 |
| Pyocin large subunit | ALO35_02004 | Not Available | Negative | 2026006 - 2026803 | 29353.9 |
| Attr | Not Available | Not Available | Positive | 2026212 - 2026223 | Not Available |
| Tail protein | ALO35_100788 | Not Available | Positive | 3066636 - 3067781 | 40452.4 |
| Tail protein | ALO35_00188 | Not Available | Positive | 3069167 - 3069520 | 12309.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
