Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ALO35_01021 | Q8FDH0 | Positive | 305263 - 306183 | 34055.9 |
| uncharacterized protein | ALO35_01022 | Not Available | Negative | 306194 - 306796 | 21940.3 |
| uncharacterized protein | ALO35_01023 | Not Available | Positive | 306857 - 308368 | 56180.3 |
| hypothetical protein | ALO35_101192 | Not Available | Negative | 308338 - 308559 | 8080.62 |
| peptidyl-prolyl cis-trans isomerase | ALO35_01024 | O08437 | Positive | 308491 - 309348 | 29906.9 |
| uncharacterized protein | ALO35_01025 | Not Available | Positive | 309716 - 310174 | 17142.2 |
| cro/ci family transcriptional regulator | ALO35_01026 | Not Available | Positive | 310275 - 310616 | 12047.3 |
| uncharacterized protein | ALO35_01027 | Not Available | Positive | 310613 - 310984 | 13827.5 |
| diguanylate cye/phosphodiesterase | ALO35_100062 | P75800 | Negative | 311121 - 312953 | 68347.2 |
| tail-specific protease | ALO35_01028 | P43669 | Negative | 313011 - 315131 | 77964.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
