Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-3-phosphoglycerate dehydrogenase | ALO35_01011 | O27051 | Negative | 296856 - 297839 | 35239.6 |
| uncharacterized protein | ALO35_01012 | Not Available | Positive | 298067 - 298744 | 24026.1 |
| putative transporter-like membrane protein | ALO35_01013 | Q2FW71 | Positive | 298824 - 299357 | 19041.7 |
| putative transporter-like membrane protein | ALO35_01014 | Not Available | Positive | 299390 - 300058 | 22880.8 |
| uncharacterized protein | ALO35_01015 | Not Available | Positive | 300467 - 300820 | 12354.7 |
| caib/baif family protein | ALO35_01016 | A9WGE3 | Positive | 300995 - 302185 | 43056.7 |
| glyoxalase family protein | ALO35_01017 | Q4KLB0 | Positive | 302241 - 302618 | 14044.0 |
| c4-dicarboxylate transport protein 3 | ALO35_01018 | Q8XR66 | Negative | 302620 - 303963 | 47241.4 |
| tartrate dehydrogenase | ALO35_01019 | P70792 | Negative | 304069 - 304224 | 5351.45 |
| tartrate dehydrogenase | ALO35_01020 | Not Available | Negative | 304214 - 305140 | 34283.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
