Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO35_01193 | Not Available | Positive | 275356 - 276306 | 34292.9 |
| yd repeat-containing protein | ALO35_01194 | Not Available | Positive | 276377 - 276762 | 14070.6 |
| rnd family efflux transporter mfp subunit | ALO35_01195 | Not Available | Positive | 277589 - 278707 | 39580.5 |
| rnd family efflux transporter mfp subunit | ALO35_01196 | C9XVZ5 | Positive | 278704 - 279792 | 39117.3 |
| rnd efflux transporter, hydrophobe/amphiphile efflux-1 family | ALO35_01197 | Not Available | Positive | 279789 - 282890 | 113959.0 |
| uncharacterized protein | ALO35_01198 | Not Available | Negative | 282943 - 283410 | 17155.0 |
| ubiquinone/menaquinone biosynthesis methyltransferase ubie | ALO35_01199 | Not Available | Negative | 283541 - 284167 | 23611.7 |
| metal abc transporter permease | ALO35_04838 | Q9KTJ6 | Negative | 284224 - 284868 | 23083.0 |
| para-like chromosome partitioning protein | ALO35_03675 | Not Available | Positive | 285297 - 286169 | 31029.8 |
| uncharacterized protein | ALO35_03676 | Not Available | Positive | 286171 - 286926 | 28196.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
