Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretory lipase precursor | ALO35_100423 | Not Available | Negative | 264738 - 266031 | 45955.6 |
| uncharacterized protein | ALO35_01184 | Not Available | Positive | 266106 - 266576 | 17036.3 |
| uncharacterized protein | ALO35_01185 | Not Available | Positive | 266569 - 267336 | 27770.1 |
| autotransporter | ALO35_04837 | Not Available | Negative | 267452 - 269527 | 70934.8 |
| autotransporter | ALO35_01187 | Not Available | Negative | 269419 - 270552 | 40459.4 |
| taurine dioxygenase | ALO35_01188 | Q88RA3 | Positive | 270772 - 271668 | 33517.5 |
| abc transporter atp-binding protein | ALO35_01189 | Q1M7R4 | Positive | 271685 - 272575 | 32793.6 |
| abc transporter permease | ALO35_01190 | Not Available | Positive | 272667 - 273533 | 31734.5 |
| sulfonate/nitrate/taurine transport system substrate-binding protein | ALO35_01191 | Not Available | Positive | 273572 - 274591 | 36934.0 |
| uncharacterized protein | ALO35_01192 | Not Available | Positive | 275026 - 275244 | 7810.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
