Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor histidine kinase | ALO35_100235 | Q06904 | Positive | 234711 - 235886 | 43534.7 |
| sensor histidine kinase | ALO35_00855 | Not Available | Positive | 236003 - 237187 | 43190.1 |
| putative lipoprotein | ALO35_00856 | Not Available | Positive | 237425 - 237748 | 11126.0 |
| glucose/sorbosone family dehydrogenase | ALO35_00857 | P75804 | Positive | 237793 - 238974 | 43442.8 |
| peptidase propeptide and ypeb domain protein | ALO35_00858 | Not Available | Negative | 239067 - 239375 | 11225.2 |
| hypothetical protein | ALO35_102716 | Not Available | Positive | 239335 - 239457 | 4377.32 |
| putative tonb-dependent siderophore receptor | ALO35_00859 | Not Available | Positive | 239676 - 240359 | 24307.4 |
| uncharacterized protein | ALO35_01796 | Not Available | Positive | 241927 - 242296 | 13980.2 |
| sodium/hydrogen exchanger family protein | ALO35_01797 | P39830 | Negative | 242337 - 244058 | 61640.7 |
| cytosolic long-chain acyl-coa thioester hydrolase family protein | ALO35_01798 | P0A0Q8 | Positive | 244352 - 244837 | 18183.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
