Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | Positive | 2015648 - 2015659 | Not Available |
| Portal protein | ALO35_01992 | P49859 | Negative | 2015907 - 2017217 | 47757.2 |
| Gp2, phage terminase, large subunit, putative | ALO35_100699 | P59217 | Negative | 2017371 - 2019104 | 65074.2 |
| Gp1 | ALO35_01994 | Not Available | Negative | 2019105 - 2019590 | 17405.0 |
| Hypothetical protein | ALO35_101170 | Not Available | Negative | 2019771 - 2020166 | 15139.8 |
| uncharacterized protein | ALO35_01995 | Not Available | Negative | 2020157 - 2020336 | 6740.85 |
| Lipoprotein | ALO35_01996 | Not Available | Negative | 2020642 - 2021001 | 13091.6 |
| Chemotaxis protein | ALO35_01997 | Not Available | Negative | 2021001 - 2021291 | 10616.6 |
| Putative antitermination q protein | ALO35_01998 | Not Available | Negative | 2021995 - 2022381 | 14569.6 |
| Hypothetical protein | ALO35_102068 | Not Available | Negative | 2022384 - 2022704 | 11364.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
