Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative carbohydrate transporter | ALO35_05135 | Q9S3J9 | Negative | 208633 - 209130 | 17356.4 |
| hypothetical protein | ALO35_102464 | Not Available | Positive | 209082 - 209207 | 4580.36 |
| l-sorbosone dehydrogenase | ALO35_05136 | Not Available | Negative | 209371 - 210768 | 49805.0 |
| hypothetical protein | ALO35_103144 | Not Available | Negative | 211119 - 211268 | 5557.71 |
| hypothetical protein | ALO35_05137 | Not Available | Negative | 211235 - 211345 | 4465.43 |
| deoxyribodipyrimidine photolyase-related protein | ALO35_02378 | A9CH39 | Negative | 211375 - 212913 | 58476.8 |
| glutathione s-transferase family protein | ALO35_05139 | O76483 | Negative | 213168 - 214166 | 35886.4 |
| transcriptional regulator, lysr family | ALO35_02379 | A0A0H2ZDG9 | Positive | 214276 - 215223 | 33969.1 |
| tonb-dependent siderophore receptor | ALO35_02380 | P38047 | Positive | 215409 - 217577 | 79417.0 |
| arsr family transcriptional regulator | ALO35_05140 | Not Available | Negative | 217628 - 218311 | 24351.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
