Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toluene tolerance protein ttg2f | ALO35_01279 | Not Available | Positive | 196914 - 197153 | 8889.66 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | ALO35_01280 | Q48EC7 | Positive | 197176 - 198441 | 44973.1 |
| atp phosphoribosyltransferase | ALO35_01281 | Q48EC8 | Positive | 198602 - 199237 | 22984.3 |
| histidinol dehydrogenase | ALO35_01282 | Q48EC9 | Positive | 199669 - 200715 | 36858.8 |
| histidinol-phosphate aminotransferase | ALO35_01283 | Q48ED0 | Positive | 200715 - 201767 | 38883.3 |
| non-ribosomal peptide synthetase module | ALO35_05134 | O30409 | Negative | 202107 - 202879 | 26988.4 |
| putative haloacid dehalogenase | ALO35_02373 | Not Available | Negative | 204058 - 204735 | 24624.2 |
| aldo/keto reductase family oxidoreductase | ALO35_02374 | P77735 | Positive | 204930 - 205940 | 37346.5 |
| methyl-accepting chemotaxis protein | ALO35_02375 | Not Available | Positive | 206229 - 207872 | 58315.1 |
| carbohydrate transporter | ALO35_02376 | Not Available | Negative | 207933 - 208694 | 25997.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
