Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, atp-binding protein | ALO35_01269 | P45073 | Negative | 190100 - 190828 | 26500.2 |
| osta family protein | ALO35_01270 | P0ADV3 | Negative | 190829 - 191377 | 19682.6 |
| uncharacterized protein | ALO35_01271 | Not Available | Negative | 191364 - 191936 | 21389.5 |
| yrbi family phosphatase | ALO35_01272 | Q8ZB47 | Negative | 191945 - 192484 | 19478.6 |
| arabinose 5-phosphate isomerase | ALO35_01273 | Q9HVW0 | Negative | 192484 - 193458 | 34505.1 |
| putative toluene tolerance abc transporter, atp-binding protein | ALO35_01274 | P63388 | Positive | 193763 - 194572 | 29549.9 |
| putative toluene tolerance proteinttg2b | ALO35_01275 | P45030 | Positive | 194572 - 195369 | 28474.3 |
| toluene tolerance protein ttg2c | ALO35_01276 | P64605 | Positive | 195369 - 195836 | 16363.9 |
| toluene tolerance protein | ALO35_01277 | Q9Z3Z9 | Positive | 195847 - 196497 | 23793.4 |
| stas domain-containing protein | ALO35_01278 | Not Available | Positive | 196494 - 196799 | 10780.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
