Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ppic-type peptidyl-prolyl cis-trans isomerase | ALO35_00031 | C5D6L9 | Negative | 161502 - 161783 | 9902.63 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | ALO35_00032 | P00888 | Negative | 161865 - 162947 | 38751.4 |
| uncharacterized protein | ALO35_00033 | Not Available | Negative | 163636 - 163872 | 8507.31 |
| luxr response regulator receiver | ALO35_00034 | Q52376 | Positive | 164531 - 165118 | 21273.1 |
| uvrabc system protein c | ALO35_00035 | Not Available | Positive | 165121 - 166821 | 61293.5 |
| uvrabc system protein c | ALO35_102231 | Q48J96 | Positive | 166782 - 166937 | 5501.61 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | ALO35_00036 | P45419 | Positive | 166964 - 167530 | 20771.2 |
| recombination-associated protein rdgc | ALO35_00642 | Not Available | Positive | 167805 - 168386 | 21419.1 |
| recombination-associated protein rdgc | ALO35_00643 | Q48LA4 | Positive | 168379 - 168729 | 13040.5 |
| bile acid transporter family protein | ALO35_00644 | O34524 | Positive | 168819 - 169766 | 33827.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
