Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO35_00024 | Not Available | Positive | 151236 - 152381 | 42723.2 |
| phosphoglucomutase | ALO35_00025 | P38569 | Positive | 152497 - 154155 | 59139.8 |
| peptidyl-prolyl cis-trans isomerase c | ALO35_00026 | P0A9L7 | Negative | 154230 - 154505 | 10111.5 |
| hypothetical protein | ALO35_103077 | Not Available | Positive | 154504 - 154626 | 4676.98 |
| twitching motility protein | ALO35_00027 | Not Available | Positive | 154629 - 155834 | 43249.5 |
| putative peptide abc transporter, atp-binding protein | ALO35_04547 | P33916 | Negative | 155781 - 156513 | 26935.7 |
| hypothetical protein | ALO35_103207 | Not Available | Positive | 156574 - 157365 | 29617.1 |
| peptide abc transporter permease | ALO35_00028 | Not Available | Negative | 157322 - 158347 | 38121.7 |
| peptide abc transporter, permease protein | ALO35_00029 | Not Available | Negative | 158344 - 159408 | 38819.1 |
| peptide abc transporter, periplasmic peptide-binding protein | ALO35_04549 | Q8FW84 | Negative | 159409 - 161310 | 71475.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
