Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO35_101682 | Not Available | Negative | 704142 - 704948 | 29862.3 |
| Hypothetical protein | ALO35_101007 | Not Available | Negative | 705008 - 705214 | 7994.73 |
| Tail assembly chaperone | ALO35_03667 | Not Available | Negative | 705211 - 705648 | 15231.1 |
| Putative major tail protein | ALO35_03668 | Not Available | Negative | 705658 - 706167 | 18082.2 |
| Hypothetical protein | ALO35_03669 | Not Available | Negative | 706220 - 706588 | 13235.5 |
| Hypothetical protein | ALO35_03670 | Not Available | Negative | 706588 - 707073 | 17322.7 |
| Putative head-tail adaptor | ALO35_03671 | Not Available | Negative | 707066 - 707404 | 12405.9 |
| uncharacterized protein | ALO35_03672 | Not Available | Negative | 707884 - 708300 | 15033.4 |
| Major capsid protein | ALO35_03673 | P49861 | Negative | 708346 - 709731 | 49960.6 |
| Clp protease | ALO35_03674 | Not Available | Negative | 709743 - 710225 | 17382.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
