Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartokinase | ALO35_05064 | Q88EI9 | Negative | 104366 - 105598 | 44447.4 |
| atp-dependent clp protease proteolytic subunit | ALO35_02502 | Q48KZ0 | Positive | 106046 - 106643 | 21842.4 |
| atp-dependent clp protease atp-binding subunit clpx | ALO35_02503 | Q4ZVM6 | Positive | 106750 - 108033 | 46959.2 |
| lon protease | ALO35_02504 | P0A9M1 | Positive | 108244 - 110640 | 88918.8 |
| nucleoid protein hu beta subunit | ALO35_02505 | Q9KHS6 | Positive | 110787 - 111059 | 9106.01 |
| periplasmic folding chaperone | ALO35_02506 | Not Available | Positive | 111265 - 111891 | 22499.0 |
| nadh-dependent enoyl-acp reductase | ALO35_05761 | Not Available | Negative | 111759 - 113162 | 52499.7 |
| enoyl | ALO35_100019 | Q9ZFE4 | Negative | 113144 - 113987 | 27679.0 |
| unknown protein sequence | ALO35_02508 | Not Available | Positive | 114047 - 114244 | 7449.0 |
| hypothetical protein | ALO35_02509 | Not Available | Negative | 116230 - 116616 | 13996.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
