Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthesis protein flip | ALO35_02798 | Q51468 | Negative | 90247 - 90999 | 27202.7 |
| flagellar protein flio | ALO35_02799 | Q51467 | Negative | 90999 - 91439 | 15917.0 |
| flagellar motor switch protein flin | ALO35_02800 | Q51466 | Negative | 91440 - 91898 | 16029.9 |
| flagellar motor switch protein flim | ALO35_02801 | Q51465 | Negative | 91960 - 92928 | 36010.7 |
| flagellar protein flil | ALO35_02802 | Not Available | Negative | 92938 - 93438 | 17965.3 |
| uncharacterized protein | ALO35_03313 | Not Available | Negative | 95336 - 95965 | 22497.7 |
| acetylornithine deacetylase | ALO35_03314 | O68873 | Negative | 96024 - 96914 | 31608.9 |
| hypothetical protein | ALO35_02081 | Not Available | Negative | 97403 - 97825 | 15654.0 |
| resolvase | ALO35_02082 | Q52563 | Positive | 97996 - 98619 | 22814.4 |
| uncharacterized protein | ALO35_02083 | Not Available | Positive | 99013 - 99345 | 12573.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
